ORIGINAL RESEARCH ARTICLE
The Impact of Hybrid Capture-Based Comprehensive Genomic Profiling on Treatment Strategies in Patients with Solid Tumors
Received Date : 01 Mar 2022
Accepted Date : 13 Jun 2022
Available Online : 01 Jul 2022
Umut DİŞELa, Fatih KÖSEb, Ahmet BİLİCİc, Mustafa ÖZGÜROĞLUd, Sezer SAĞLAMe, Mesut ŞEKERf, Sercan AKSOYg, İbrahim TEKh, Nil Molinas MANDELi, Gökhan DEMİRi, Çağatay ARSLANk, Mutlu DEMİRAYl, Mehmet Akif ÖZTÜRKm, Taflan SALEPÇİn, Yeşim ERALPo, Fatih SELÇUKBİRİCİKp, Gökçe TEMİZAŞr, Ebru Gül FİDANr
aClinic of Medical Oncology, Acıbadem Adana Hospital, Adana, Türkiye
bDivision of Medical Oncology, Başkent University Adana Dr. Turgut Noyan Application and Research Center, Adana, Türkiye
cDivision of Medical Oncology, İstanbul Medipol University Faculty of Medicine, İstanbul, Türkiye
dDivision of Medical Oncology, İstanbul University-Cerrahpaşa, Cerrahpaşa Faculty of Medicine, İstanbul, Türkiye
eDivision of Medical Oncology, Demiroğlu Bilim University İstanbul Florence Nightingale Hospital, İstanbul, Türkiye
fDivision of Medical Oncology, Bezmiâlem Vakıf University Faculty of Medicine, İstanbul, Türkiye
gDivision of Medical Oncology, Hacettepe University Institute of Cancer, Ankara, Türkiye
hClinic of Medical Oncology, Medicana International Ankara Hospital, Ankara, Türkiye
iClinic of Medical Oncology, American Hospital, İstanbul, Türkiye
kClinic of Oncology, Acıbadem Maslak Hospital, İstanbul, Türkiye
kClinic of Medical Oncology, Medical Park İzmir Hospital, İzmir, Türkiye
lClinic of Medical Oncology, Medicana International İstanbul Hospital, İstanbul, Türkiye
mClinic of Oncology, VM Medical Park Pendik Hospital, İstanbul, Türkiye
nClinic of Medical Oncology, İstanbul Oncology Hospital, İstanbul, Türkiye
oClinic of Medical Oncology, Acıbadem Maslak Hospital, İstanbul, Türkiye
Division of Medical Oncology, Koç University Faculty of Medicine, İstanbul, Türkiye
rRoche Pharma, İstanbul, Türkiye
Doi: 10.37047/jos.2022-89310 - Article's Language: EN
J Oncol Sci. 2022;8(2):87-93
ABSTRACT
The development of bioinformatics and comprehensive genomic profiling (CGP) has provided insights into the applicability
and functionality of the genomic alterations (GA). In this study, we evaluated the impact of CGP on the treatment plan and outcomes
in a significant number of patients. Material and Methods: We carried out a retrospective case-control study on 164 adult patients
with advanced solid tumors from 15 oncology centers in Türkiye. Results: In all cases, CGP was performed within 23.8 [standard deviation
(SD)±32.1] months of initial diagnosis. Non-small cell lung carcinoma, breast cancer, unknown primary carcinoma, colorectal carcinoma, and
sarcoma were among the most common tumor types, accounting for 61.5% of all cases. CGP was performed immediately after the diagnosis
of advanced cancer in 13 patients (7.9%). In 158 patients (96.4%), at least one GA was found as per the CGP report. Also, in the reports, the
average tumor mutational burden (TMB) and GAs were 7.3 (SD±8.7) mut/Mb and 3.5 (SD±2.0), respectively. According to CGP reports, 58
patients had 79 evidence-based drug suggestions for their particular tumor type, whereas 97 patients had 153 evidence-based drug suggestions
for another tumor type. After the primary oncologist interpreted the CGP reports, significant changes were made to the treatment of 35 (21.3%)
patients. Conclusion: We strongly believe that in the future, high-TMB or other tumor-agnostic biomarkers will become much more affordable,
and CGP will serve as one of the major decision-making tools for the treatment of patients along with pathological, radiological or laboratory
tests.
Keywords: Comprehensive genomic hybridization; genomics; neoplasms; retrospective studies
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